SGR: Strawberry Genomic Resources
 
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  • Home
  • Project description
  • Participating labs
  • Education Activities
  • Bioinf. Workshop
  • Collaborators
  • Publication
  • Genome reannotation
  • RNA-Seq Data Analysis
  • Contacts
  • Item 1a
  • Item 2a
  • Item Folder 3a
    • Sub Item 3.1a
    • Sub Item 3.2a
    • Sub Item 3.3a
    • Sub Item 3.4a
  • Item 4a
  • Item Folder 5a
    • Sub Item 5.1a
    • Item Folder 5.2a
      • Sub Item 5.2.1a
      • Sub Item 5.2.2a
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      • Sub Item 5.2.4a
  • Item 6a
  • Samples Info.
  • Differential Expression
    • DEGSeq
    • DESeq
  • Samples Description
  • Gbrowse
  • PO Mapping
  • Search Genes
    • By Gene No.
    • By Gene Desc.
  • Fruit transcriptome analysis
    • Gene Clustering
    • TF Clustering
  • More genomic resources
    • Hormone genes
    • Transcription factors
    • GO assignment
    • Fruit Specific Genes
    • Leaf & Seedling Specific Genes
  • Workshop Info.
  • Parking Directions

Publications:
  • Hollender CA, Geretz AC, Slovin JP, Liu Z.Flower and early fruit development in a diploid strawberry, Fragaria vesca. Planta. 2012 Jun;235(6):1123-39. Epub 2011 Dec 24. PubMed PMID: 22198460.
  • Kang, C., Darwish, O., Geretz, A., Shahan, R., Alkharouf, N., & Liu, Z. (2013). Genome-Scale Transcriptomic Insights into Early-Stage Fruit Development in Woodland Strawberry Fragaria vesca. The Plant Cell Online.
  • Darwish, O., Slovin, J. P., Kang, C., Hollender, C. A., Geretz, A., Houston, S., Liu, Z, & Alkharouf, N. W. (2013). SGR: an online genomic resource for the woodland strawberry. BMC plant biology
  • BMC Plant Biology
  • Hollender, C. A., Kang, C., Darwish, O., Geretz, A., Matthews, B. F., Slovin, J., Alkharouf, N, & Liu, Z. (2014). Floral transcriptomes in woodland strawberry uncover developing receptacle and anther gene networks.
  • Plant physiology
 

 

 

 

 
  • Supported By

  • National Science Foundation

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  • Calendar


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